FT - Study of Residue Periodicities in Sequences
Pasquier, C.M., Promponas, V.I., Varvayannis, N.J. and Hamodrakas, S.J.
Department of Cell Biology and Biophysics,
Faculty of Biology,
University of Athens
Greece
New feature in version 0.9.4
A button was added which allows to automatically run FT for the most frequent
residues in the sequence.
New feature in version 0.9.3
Shortcut buttons which allows to execute FT for the following predefined
groups of residues have been added:
- a-helix
- Execute the program for the group of residues
A, V, L, I, F, W, D, E, Q, M, H, K
- ß-sheet
- Execute the program for the group of residues
V, L, I, F, W, Y, T, C, Q, M
- ß-turn
- Execute the program for the group of residues
G, P, D, N, S, C, K, W, Y, Q, T, R, E
- Hydrophobic
- Execute the program for the group of residues
C, V, I, L, M, F, Y, W, A, P
- Polar
- Execute the program for the group of residues
D, E, H, K, R, S, T, N, Q
- Charged
- Execute the program for the group of residues
H, R, K, D, E
- Charged+
- Execute the program for the group of residues
H, R, K
- Charged-
- Execute the program for the group of residues
D, E
- Aromatic
- Execute the program for the group of residues
H, F, W, Y
- Aliphatic
- Execute the program for the group of residues
V, L, I, A
New feature in version 0.9.2
In the text area of the sequence specification (in the input form),
you can now specify the URL of a sequence file. The program connects
automatically to the specified address and read the sequence from the
file. Try with the sequence of collagen (CA13_HUMAN) stored on our site
at '
http://athina.biol.uoa.gr/FT/CA13_HUMAN.SEQ'.