|
TABLE 5: Set of 60 proteins (MÖLLER-SET AB) |
Name = Identification of the protein in SwissProt (ID and AC code)
len = length of the sequence
OTM = number of observed transmembrane segments
PTM = number of predicted transmembrane segments
Observed segments = boundaries of observed segments
Predicted segments = boundaries of predicted segments
| NAME | len | OTM | PTM | Observed segments | Predicted segments |
| 1B14_HUMAN P03989 | 361 | 1 | 2 | 309-332 | 8-25, 306-332 |
| ADTA_RICPR P19568 | 498 | 12 | 10 | 34-54, 68-88, 93-113, 148-168, 185-205, 219-239, 280-300, 321-341, 349-369, 380-400, 439-459, 466-486 | 64-82, 93-116, 138-168, 186-206, 219-235, 278-294, 322-348, 350-379, 381-396, 443-482 |
| ARSB_ECOLI P37310 | 429 | 12 | 11 | 7-26, 60-80, 93-111, 121-141, 149-168, 178-198, 221-241, 246-263, 280-299, 317-336, 351-371, 401-421 | 2-24, 26-48, 50-72, 93-128, 130-165, 175-194, 227-263, 277-301, 307-346, 375-390, 399-428 |
| ATC1_RABIT P04191 | 1001 | 10 | 7 | 49-69, 90-110, 254-273, 296-313, 758-777, 788-808, 829-851, 898-917, 931-949, 965-985 | 60-78, 87-107, 263-279, 291-315, 769-798, 831-859, 931-950 |
| ATPL_ECOLI P00844 | 79 | 2 | 2 | 11-31, 53-73 | 8-33, 53-78 |
| BACR_HALHA P02945 | 262 | 7 | 7 | 24-42, 57-75, 92-109, 121-140, 148-167, 186-204, 217-236 | 23-42, 61-79, 99-117, 121-136, 138-169, 190-207, 209-237 |
| BOFA_BACSU P24282 | 87 | 2 | 3 | 3-23, 37-57 | 3-27, 29-60, 62-86 |
| CB22_PEA P07371 | 269 | 3 | 2 | 92-126, 160-180, 207-236 | 155-178, 223-239 |
| COAB_BPFD P03617 | 73 | 1 | 1 | 48-68 | 43-62 |
| COAB_BPPF1 P03621 | 82 | 1 | 2 | 56-78 | 20-39, 57-76 |
| COAT_BPPF3 P03623 | 44 | 1 | 1 | 19-36 | 17-39 |
| CODB_ECOLI P25525 | 419 | 12 | 11 | 20-39, 52-71, 101-120, 128-147, 153-172, 193-212, 222-242, 258-277, 301-320, 322-341, 359-378, 381-400 | 19-41, 43-79, 89-126, 128-162, 164-179, 193-210, 223-253, 255-281, 288-305, 307-341, 358-398 |
| COX1_BOVIN P00396 | 514 | 12 | 12 | 12-40, 51-86, 95-117, 141-170, 183-212, 228-261, 270-286, 299-327, 336-357, 371-400, 407-433, 447-478 | 18-37, 56-90, 100-134, 136-169, 182-206, 234-254, 267-293, 308-325, 329-359, 371-400, 408-427, 452-473 |
| COX2_BOVIN P00404 | 227 | 2 | 2 | 19-42, 60-83 | 28-46, 64-81 |
| COX2_PARDE P08306 | 298 | 2 | 3 | 56-88, 104-134 | 17-34, 66-87, 108-130 |
| COX3_BOVIN P00415 | 261 | 7 | 6 | 16-34, 41-66, 73-105, 129-152, 156-183, 191-223, 233-256 | 15-49, 81-108, 129-144, 162-179, 190-220, 237-260 |
| COX3_PARDE P06030 | 273 | 7 | 7 | 15-35, 48-76, 79-114, 139-165, 168-196, 203-236, 244-273 | 15-37, 39-67, 84-118, 137-158, 174-191, 196-232, 249-272 |
| COX4_BOVIN P00423 | 169 | 1 | 1 | 99-124 | 103-120 |
| COX4_PARDE P77921 | 50 | 1 | 1 | 17-48 | 24-48 |
| COXD_BOVIN P07471 | 97 | 1 | 1 | 25-49 | 28-43 |
| COXH_BOVIN P04038 | 73 | 1 | 1 | 12-52 | 19-35 |
| COXK_BOVIN P07470 | 80 | 1 | 1 | 47-75 | 55-74 |
| COXM_BOVIN P13183 | 88 | 1 | 1 | 41-67 | 48-70 |
| COXO_BOVIN P00430 | 63 | 1 | 1 | 34-60 | 37-56 |
| COXQ_BOVIN P10175 | 70 | 1 | 1 | 36-59 | 40-59 |
| CPXA_ECOLI P08336 | 457 | 2 | 2 | 8-29, 164-189 | 2-28, 163-184 |
| CVAA_ECOLI P22519 | 413 | 1 | 1 | 21-36 | 7-38 |
| CX1B_PARDE P98002 | 558 | 12 | 12 | 29-59, 83-120, 127-151, 177-206, 218-251, 263-299, 304-319, 333-364, 370-395, 405-437, 441-469, 479-514 | 31-49, 89-118, 133-155, 181-205, 209-247, 270-298, 301-332, 334-360, 362-393, 406-433, 447-462, 487-514 |
| DHG_ECOLI P15877 | 796 | 5 | 5 | 11-37, 41-58, 63-81, 96-110, 119-141 | 15-49, 51-85, 87-101, 103-135, 695-727 |
| DTPT_LACLA P36574 | 463 | 12 | 13 | 3-21, 31-49, 59-77, 82-100, 121-139, 148-166, 191-209, 221-239, 260-278, 302-320, 339-357, 392-410 | 3-23, 25-49, 52-68, 70-98, 121-141, 143-167, 191-214, 216-241, 256-274, 301-320, 337-357, 359-388, 430-451 |
| EXBB_ECOLI P18783 | 244 | 3 | 3 | 16-39, 128-155, 162-194 | 21-42, 131-167, 171-199 |
| FRDC_ECOLI P03805 | 131 | 3 | 3 | 22-49, 66-90, 105-128 | 33-51, 56-82, 113-130 |
| FRDD_ECOLI P03806 | 119 | 3 | 3 | 9-35, 61-89, 97-115 | 12-47, 55-80, 99-118 |
| GLPA_HUMAN P02724 | 150 | 1 | 2 | 92-114 | 4-27, 92-110 |
| HLYB_ECOLI P08716 | 707 | 8 | 4 | 38-51, 58-78, 158-179, 191-211, 269-289, 295-315, 388-408, 412-432 | 158-175, 191-211, 273-307, 388-425 |
| KCSA_STRLI Q54397 | 160 | 2 | 2 | 28-47, 88-111 | 26-50, 81-111 |
| KDPD_ECOLI P21865 | 894 | 4 | 3 | 401-423, 428-444, 446-466, 475-498 | 401-437, 439-466, 470-494 |
| KGTP_ECOLI P17448 | 432 | 12 | 11 | 26-54, 62-80, 96-116, 120-136, 163-185, 196-214, 244-261, 275-301, 312-330, 337-360, 369-392, 403-423 | 30-58, 62-84, 100-136, 166-183, 195-214, 244-262, 278-302, 312-332, 334-360, 371-389, 399-419 |
| KPM1_ECOLI P23889 | 258 | 6 | 6 | 31-54, 62-81, 109-132, 144-165, 175-195, 227-247 | 30-59, 63-80, 110-137, 140-165, 174-196, 227-248 |
| LHA4_RHOAC P26789 | 53 | 1 | 1 | 14-34 | 9-45 |
| LHB5_RHOAC P26790 | 41 | 1 | 1 | 15-36 | 21-40 |
| LSPA_ECOLI P00804 | 164 | 4 | 4 | 12-26, 70-89, 96-113, 142-159 | 8-31, 60-88, 99-117, 137-153 |
| LYSP_ECOLI P25737 | 488 | 12 | 12 | 21-41, 55-75, 104-124, 130-148, 160-180, 199-217, 244-263, 283-303, 347-364, 371-391, 415-432, 449-469 | 23-44, 46-77, 92-123, 125-148, 160-184, 192-219, 244-265, 285-317, 347-372, 374-390, 414-433, 446-466 |
| MALF_ECOLI P02916 | 514 | 8 | 7 | 17-36, 40-58, 67-92, 276-306, 319-336, 370-392, 426-452, 484-506 | 17-58, 67-92, 276-306, 319-340, 371-392, 419-444, 483-504 |
| MEL_APIME P01501 | 70 | 1 | 1 | 44-63 | 3-23 |
| MSCL_MYCTU O53898 | 151 | 2 | 2 | 15-43, 69-89 | 14-32, 66-94 |
| MTR_ECOLI P22306 | 414 | 11 | 10 | 11-34, 39-61, 87-109, 123-145, 152-174, 189-210, 228-251, 282-303, 322-341, 344-365, 387-409 | 2-29, 31-63, 89-114, 125-152, 154-175, 188-207, 228-249, 284-310, 326-367, 386-413 |
| OPSD_BOVIN P02699 | 348 | 7 | 7 | 37-63, 74-96, 111-133, 153-173, 203-224, 253-274, 287-308 | 34-57, 74-105, 107-133, 153-175, 203-228, 253-284, 287-301 |
| PRRB_RHOSH Q53068 | 462 | 6 | 5 | 26-45, 52-70, 79-96, 104-123, 130-149, 165-182 | 23-41, 43-68, 83-122, 124-152, 159-181 |
| PTNC_ECOLI P08187 | 266 | 6 | 7 | 5-24, 50-69, 84-102, 106-124, 151-170, 182-201 | 6-21, 38-62, 64-80, 82-114, 138-164, 177-210, 212-239 |
| PTND_ECOLI P08188 | 286 | 1 | 5 | 262-281 | 112-130, 132-163, 191-210, 237-258, 261-285 |
| PUCC_RHOCA P23462 | 461 | 12 | 10 | 37-56, 63-83, 110-129, 143-163, 183-202, 210-228, 262-281, 303-319, 339-355, 359-376, 395-415, 437-456 | 39-60, 62-83, 109-131, 139-167, 179-203, 254-285, 302-316, 339-378, 390-417, 419-456 |
| RCEH_RHOSH P11846 | 260 | 1 | 1 | 12-31 | 2-31 |
| RCEH_RHOVI P06008 | 258 | 1 | 1 | 12-30 | 10-25 |
| RCEL_RHOSH P02954 | 281 | 5 | 6 | 33-52, 84-104, 115-136, 170-191, 225-250 | 16-35, 37-59, 73-98, 111-151, 169-195, 227-257 |
| RCEL_RHOVI P06009 | 273 | 5 | 6 | 32-52, 83-110, 115-138, 170-197, 225-248 | 21-57, 73-98, 111-151, 174-195, 224-250, 252-272 |
| RCEM_RHOSH P02953 | 307 | 5 | 6 | 52-72, 116-135, 143-163, 202-221, 264-285 | 31-50, 52-86, 105-132, 145-171, 196-226, 264-292 |
| RCEM_RHOVI P06010 | 323 | 5 | 5 | 51-75, 110-136, 142-165, 197-222, 259-283 | 46-75, 100-125, 143-179, 194-225, 263-289 |
| TRD1_ECOLI P09130 | 717 | 2 | 2 | 28-47, 105-130 | 24-63, 107-130 |
| TRSR_HUMAN P02786 | 760 | 1 | 2 | 68-88 | 66-89, 540-558 |