Example of output produced

PREDICTED TRANSMEMBRANE SEGMENTS

# TMBeginEnd
12340
27493
3131163
4192214

SEQUENCE: CXB1_RAT (Shows your sequence name, if defined)

              1         2         3         4         5         6
     123456789012345678901234567890123456789012345678901234567890
         .    |    .    |    .    |    .    |    .    |    .    |
0000 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
0060 NSVCYDHFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
0120 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCEAFPCPNTVDCF
0180 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
0240 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC

Predicted transmembrane regions are indicated in blue
Observed transmembrane regions are underlined (if they are chosen to be displayed)

The plot is here (This is a link to the PostScript file of the denoised 'hydropathy' signal)

Topology prediction for your sequence is provided, executing:

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